PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do017868.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 154aa    MW: 17119.2 Da    PI: 7.7886
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do017868.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.77.8e-162887463
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                 +re+r+ +NRe+ArrsR+RK++ ++eL ++v+ L+aeN + + ++  +  ++a++++e+
  Do017868.1 28 HRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQAENARVAGRAADIASQYARVEQEN 87
                58****************************************************999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.7E-122272No hitNo description
SMARTSM003382.5E-172589IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.1512790IPR004827Basic-leucine zipper domain
PfamPF001701.7E-122887IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.91E-102977No hitNo description
CDDcd147029.61E-163081No hitNo description
PROSITE patternPS0003603247IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006971Biological Processhypotonic response
GO:0009267Biological Processcellular response to starvation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSSSLSPSL SPAGRMSGSD GDSPADTHRR EKRRLSNRES ARRSRLRKQQ HLDELVQEVA  60
RLQAENARVA GRAADIASQY ARVEQENTVL RARAAELGDR LRSVNEVLRV VEEFSGVAMD  120
IQEEMPADDP LLRPWQLPYP AAAMPIGGAH MLQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14147RRSRLRK
24148RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00419DAPTransfer from AT3G62420Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0342891e-176BT034289.1 Zea mays full-length cDNA clone ZM_BFc0009B07 mRNA, complete cds.
GenBankBT0884081e-176BT088408.1 Zea mays full-length cDNA clone ZM_BFc0179N23 mRNA, complete cds.
GenBankEU9647361e-176EU964736.1 Zea mays clone 281235 ocs element-binding factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962768.11e-97PREDICTED: ocs element-binding factor 1
SwissprotP240681e-95OCS1_MAIZE; Ocs element-binding factor 1
TrEMBLK3ZAH01e-97K3ZAH0_SETIT; Uncharacterized protein
STRINGSi023541m4e-97(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.14e-33basic region/leucine zipper motif 53